SCOP 1.69: Domain d1oxy_3: 1oxy 380-627

Lineage for d1oxy_3 (1oxy 380-627)

1. Root: SCOP 1.69

2. Class b: All beta proteins [48724] (144 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (23 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.18: E set domains [81296] (18 families)
   "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

5. Family b.1.18.3: Arthropod hemocyanin, C-terminal domain [81283] (1 protein)

6. Protein Arthropod hemocyanin, C-terminal domain [49228] (2 species)
   elaborated with many loop insertions in the common fold

7. Species Horseshoe crab (Limulus polyphemus) [TaxId:6850] [49229] (4 PDB entries)

8. Domain d1oxy_3: 1oxy 380-627 [21862]
   Other proteins in same PDB: d1oxy_1, d1oxy_2

Details for d1oxy_3

PDB Entry: 1oxy, 2.4 Å

PDB Description: crystallographic analysis of oxygenated and deoxygenated states of arthropod hemocyanin shows unusual differences

SCOP Domain Sequences for d1oxy_3:

Sequence, based on SEQRES records:

>d1oxy_3 b.1.18.3 (380-627) Arthropod hemocyanin, C-terminal domain {Horseshoe crab (Limulus polyphemus)}
pydhdvlnfpdiqvqdvtlharvdnvvhtfmreqelelkhginpgnarsikakyyhldhe
pfsyavnvqnnsasdkhatvriflapkydelgneikadelrrtaieldkfktdlhpgknt
vvrhsldssvtlshqptfedllhgvglnehkseycscgwpshllvpkgnvagmeyhlfvm
ltdwdkdkvdgsesvacvdavsycgardhkypdkkpmgfpfdrpihtehisdfltnnmfi
kdikikfh

Sequence, based on observed residues (ATOM records):

>d1oxy_3 b.1.18.3 (380-627) Arthropod hemocyanin, C-terminal domain {Horseshoe crab (Limulus polyphemus)}
pydhdvlnfpdiqvqdvtlharvdnvvhtfmreqelelkhgsikakyyhldhepfsyavn
vqnnsasdkhatvriflapkydelgneikadelrrtaieldkfktdlhpgkntvvrhsld
ssvtlshqptfedllseycscgwpshllvpkgnvagmeyhlfvmltdwdkdkvdvacvda
vsycgardhkypdkkpmgfpfdrpihtehisdfltnnmfikdikikfh

Timeline for d1oxy_3:

• d1oxy_3 first appeared (with stable ids) in SCOP 1.55
  
• d1oxy_3 appears in SCOP 1.67
  
• d1oxy_3 appears in SCOP 1.71
  
• d1oxy_3 appears in the current release, SCOPe 2.08, called d1oxya3