Lineage for d3zrfd_ (3zrf D:)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1402144Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1402145Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1402146Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1402170Protein Elongin B [54246] (2 species)
  7. 1402171Species Human (Homo sapiens) [TaxId:9606] [54247] (16 PDB entries)
  8. 1402214Domain d3zrfd_: 3zrf D: [218419]
    Other proteins in same PDB: d3zrfb_, d3zrfc_, d3zrfe_, d3zrff_, d3zrfh_, d3zrfi_, d3zrfk_, d3zrfl_
    automated match to d1lm8b_

Details for d3zrfd_

PDB Entry: 3zrf (more details), 2.8 Å

PDB Description: pVHL54-213-EloB-EloC complex_apo
PDB Compounds: (D:) Transcription elongation factor B polypeptide 2

SCOPe Domain Sequences for d3zrfd_:

Sequence, based on SEQRES records: (download)

>d3zrfd_ d.15.1.1 (D:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafraddtfealciepfssppelpd

Sequence, based on observed residues (ATOM records): (download)

>d3zrfd_ d.15.1.1 (D:) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
mdvflmirrhkttiftdakesstvfelkrivegilkrppdeqrlykddqllddgktlgec
gftsqtarpqapatvglafrtfealciepfssppelpd

SCOPe Domain Coordinates for d3zrfd_:

Click to download the PDB-style file with coordinates for d3zrfd_.
(The format of our PDB-style files is described here.)

Timeline for d3zrfd_: