Lineage for d3vdqd_ (3vdq D:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

    has additional subdomain(s) that are not in the common domain
  6. 2842913Protein automated matches [190085] (59 species)
    not a true protein
  7. 2842940Species Alcaligenes faecalis [TaxId:511] [188427] (11 PDB entries)
  8. 2842950Domain d3vdqd_: 3vdq D: [217780]
    automated match to d2yz7d_
    complexed with act, ca, cl, nad

Details for d3vdqd_

PDB Entry: 3vdq (more details), 2.2 Å

PDB Description: Crystal structure of alcaligenes faecalis D-3-hydroxybutyrate dehydrogenase in complex with NAD(+) and acetate
PDB Compounds: (D:) D-3-hydroxybutyrate dehydrogenase

SCOPe Domain Sequences for d3vdqd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3vdqd_ c.2.1.2 (D:) automated matches {Alcaligenes faecalis [TaxId: 511]}
mlkgkkavvtgstsgiglamatelakagadvvingfgqpediererstleskfgvkayyl
nadlsdaqatrdfiakaaealggldilvnnagiqhtapieefpvdkwnaiialnlsavfh
gtaaalpimqkqgwgriiniasahglvasvnksayvaakhgvvgltkvtalenagkgitc
naicpgwvrtplvekqieaisqqkgidieaaarellaekqpslqfvtpeqlggaavflss
aaadqmtgttlsldggwtar

SCOPe Domain Coordinates for d3vdqd_:

Click to download the PDB-style file with coordinates for d3vdqd_.
(The format of our PDB-style files is described here.)

Timeline for d3vdqd_: