Lineage for d1hdmb1 (1hdm B:88-185)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1513476Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1515012Protein Class II MHC beta chain, C-terminal domain [88625] (6 species)
  7. 1515013Species Human (Homo sapiens), HLA-DM [TaxId:9606] [88626] (1 PDB entry)
    probably orthologous to the mouse H2-DM
  8. 1515014Domain d1hdmb1: 1hdm B:88-185 [21584]
    Other proteins in same PDB: d1hdma1, d1hdma2, d1hdmb2

Details for d1hdmb1

PDB Entry: 1hdm (more details), 2.5 Å

PDB Description: histocompatibility antigen hla-dm
PDB Compounds: (B:) protein (class II histocompatibility antigen, m beta chain)

SCOPe Domain Sequences for d1hdmb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1hdmb1 b.1.1.2 (B:88-185) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DM [TaxId: 9606]}

SCOPe Domain Coordinates for d1hdmb1:

Click to download the PDB-style file with coordinates for d1hdmb1.
(The format of our PDB-style files is described here.)

Timeline for d1hdmb1:

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Domains from same chain:
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