Lineage for d3pnub1 (3pnu B:1-335)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2833366Superfamily c.1.9: Metallo-dependent hydrolases [51556] (19 families) (S)
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
  5. 2834067Family c.1.9.0: automated matches [191327] (1 protein)
    not a true family
  6. 2834068Protein automated matches [190150] (36 species)
    not a true protein
  7. 2834112Species Campylobacter jejuni [TaxId:192222] [226030] (1 PDB entry)
  8. 2834114Domain d3pnub1: 3pnu B:1-335 [214882]
    Other proteins in same PDB: d3pnua2, d3pnub2
    automated match to d2z29b_
    complexed with po4, zn

Details for d3pnub1

PDB Entry: 3pnu (more details), 2.4 Å

PDB Description: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from campylobacter jejuni.
PDB Compounds: (B:) dihydroorotase

SCOPe Domain Sequences for d3pnub1:

Sequence, based on SEQRES records: (download)

>d3pnub1 c.1.9.0 (B:1-335) automated matches {Campylobacter jejuni [TaxId: 192222]}
mklknpldmhlhlrdnqmleliaplsardfcaavimpnlipplcnledlkaykmrilkac
kdenftplmtlffknydekflysakdeifgiklypagittnsnggvssfdieylkptlea
msdlnipllvhgetndfvmdresnfakiyeklakhfprlkivmehittktlcellkdyen
lyatitlhhliitlddviggkmnphlfckpiakryedkealcelafsgyekvmfgsdsap
hpkdtkeccgcaagvfsapvilpvlaelfkqnsseenlqkflsdntckiydlkfkedkil
tleekewqvpnvyedkynqvvpymageilkfqlkh

Sequence, based on observed residues (ATOM records): (download)

>d3pnub1 c.1.9.0 (B:1-335) automated matches {Campylobacter jejuni [TaxId: 192222]}
mklknpldmhlhlrdnqmleliaplsardfcaavimpnlipplcnledlkaykmrilkac
kdenftplmtlffknydekflysakdeifgiklypagittnssfdieylkptleamsdln
ipllvhgetndfvmdresnfakiyeklakhfprlkivmehittktlcellkdyenlyati
tlhhliitlddviggkmnphlfckpiakryedkealcelafsgyekvmfgsdsaphpkdg
caagvfsapvilpvlaelfkqnsseenlqkflsdntckiydlkfkedkiltleekewqvp
nvyedkynqvvpymageilkfqlkh

SCOPe Domain Coordinates for d3pnub1:

Click to download the PDB-style file with coordinates for d3pnub1.
(The format of our PDB-style files is described here.)

Timeline for d3pnub1:

View in 3D
Domains from same chain:
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d3pnub2