SCOPe 2.08: Domain d1deec2: 1dee C:1108-1214

Lineage for d1deec2 (1dee C:1108-1214)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein Immunoglobulin light chain kappa constant domain, CL-kappa [88566] (4 species)

7. Species Human (Homo sapiens) [TaxId:9606] [88569] (147 PDB entries)
   including humanized antibodies (chimeric proteins with human constant domains)
   SQ NA # humanized antibody ! Uniprot P01834 # KAC_HUMAN Ig kappa chain C region ! SQ P01834 # KAC_HUMAN Ig kappa chain C region. ! SQ NA # engineered antibody

8. Domain d1deec2: 1dee C:1108-1214 [21410]
   Other proteins in same PDB: d1deea1, d1deeb1, d1deeb2, d1deec1, d1deed1, d1deed2, d1deee1, d1deef1, d1deef2, d1deeg_, d1deeh_
   part of IgM RF 2A2

Details for d1deec2

PDB Entry: 1dee, 2.7 Å

PDB Description: structure of s. aureus protein a bound to a human igm fab

PDB Compounds: (C:) igm rf 2a2

SCOPe Domain Sequences for d1deec2:

Sequence; same for both SEQRES and ATOM records:

>d1deec2 b.1.1.2 (C:1108-1214) Immunoglobulin light chain kappa constant domain, CL-kappa {Human (Homo sapiens) [TaxId: 9606]}
rtvaapsvfifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqd
skdstyslsstltlskadyekhkvyacevthqglsspvtksfnrgec

Timeline for d1deec2:

• d1deec2 first appeared (with stable ids) in SCOP 1.55
  
• d1deec2 appears in SCOPe 2.07