SCOPe 2.04: Domain d3krpd_: 3krp D:

Lineage for d3krpd_ (3krp D:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (27 species)
   not a true protein

7. Species Mentha x [TaxId:34256] [196410] (7 PDB entries)

8. Domain d3krpd_: 3krp D: [212524]
   automated match to d3oacd_
   complexed with edo, gpp, mg, ppv

Details for d3krpd_

PDB Entry: 3krp, 2.42 Å

PDB Description: mint heterotetrameric geranyl pyrophosphate synthase in complex with magnesium and gpp

PDB Compounds: (D:) Geranyl diphosphate synthase large subunit

SCOPe Domain Sequences for d3krpd_:

Sequence, based on SEQRES records:

>d3krpd_ a.128.1.0 (D:) automated matches {Mentha x [TaxId: 34256]}
mfdfdgymlrkaksvnkaleaavqmkeplkihesmrysllaggkrvrpmlciaacelvgg
destampaacavemihtmslmhddlpcmdnddlrrgkptnhmafgesvavlagdallsfa
fehvaaatkgapperivrvlgelavsigseglvagqvvdvcsegmaevgldhlefihhhk
taallqgsvvlgailgggkeeevaklrkfancigllfqvvddildvtksskelgktagkd
lvadkttypkligvekskefadrlnreaqeqllhfhphraaplialanyiayrdn

Sequence, based on observed residues (ATOM records):

>d3krpd_ a.128.1.0 (D:) automated matches {Mentha x [TaxId: 34256]}
mfdfdgymlrkaksvnkaleaavqmkeplkihesmrysllaggkrvrpmlciaacelvgg
destampaacavemihtmslmhddlpcmdnddlrrgkptnhmafgesvavlagdallsfa
fehvaaatkgapperivrvlgelavsigseglvagqvvdvcsegmaevgldhlefihhhk
taallqgsvvlgailgggkeeevaklrkfancigllfqvvddildvtksskelgktypkl
igvekskefadrlnreaqeqllhfhphraaplialanyiayrdn

Timeline for d3krpd_:

• d3krpd_ first appeared in SCOPe 2.03
  
• d3krpd_ appears in SCOPe 2.05
  
• d3krpd_ appears in the current release, SCOPe 2.08, called d3krpd1