Lineage for d3kqhb1 (3kqh B:189-325)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2473887Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2473888Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2478565Family c.37.1.14: RNA helicase [52724] (4 proteins)
    duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  6. 2478576Protein HCV helicase domain [52725] (1 species)
  7. 2478577Species Human hepatitis C virus (HCV), different isolates [TaxId:11103] [52726] (17 PDB entries)
  8. 2478622Domain d3kqhb1: 3kqh B:189-325 [212491]
    automated match to d1heia1
    protein/DNA complex

Details for d3kqhb1

PDB Entry: 3kqh (more details), 2.4 Å

PDB Description: three conformational snapshots of the hepatitis c virus ns3 helicase reveal a ratchet translocation mechanism
PDB Compounds: (B:) Serine protease/NTPase/helicase NS3

SCOPe Domain Sequences for d3kqhb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3kqhb1 c.37.1.14 (B:189-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
sppavpqtfqvahlhaptgsgkstkvpaayaaqgykvlvlnpsvaatlgfgaymskahgi
dpnirtgvrtittgapitystygkfladggcsggaydiiicdechstdsttilgigtvld
qaetagarlvvlatatp

SCOPe Domain Coordinates for d3kqhb1:

Click to download the PDB-style file with coordinates for d3kqhb1.
(The format of our PDB-style files is described here.)

Timeline for d3kqhb1:

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Domains from same chain:
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d3kqhb2