SCOPe 2.04: Domain d3ii9d1: 3ii9 D:3-242

Lineage for d3ii9d1 (3ii9 D:3-242)

1. Root: SCOPe 2.04

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
   2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology

4. Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families)
   flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)

5. Family e.6.1.0: automated matches [227203] (1 protein)
   not a true family

6. Protein automated matches [226934] (17 species)
   not a true protein

7. Species Burkholderia pseudomallei [TaxId:320372] [225462] (6 PDB entries)

8. Domain d3ii9d1: 3ii9 D:3-242 [211706]
   Other proteins in same PDB: d3ii9a2, d3ii9b2, d3ii9c2, d3ii9d2
   automated match to d1siqa2
   complexed with gol, mg, peg, pg4, pge

Details for d3ii9d1

PDB Entry: 3ii9, 1.74 Å

PDB Description: Crystal structure of glutaryl-coa dehydrogenase from Burkholderia pseudomallei at 1.73 Angstrom

PDB Compounds: (D:) Glutaryl-CoA dehydrogenase

SCOPe Domain Sequences for d3ii9d1:

Sequence, based on SEQRES records:

>d3ii9d1 e.6.1.0 (D:3-242) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
aatfhwddpllldqqladdermvrdaahayaqgklaprvteafrhettdaaifremgeig
llgptipeqyggpgldyvsygliarevervdsgyrsmmsvqsslvmvpifefgsdaqkek
ylpklatgewigcfgltepnhgsdpgsmvtrarkvpggyslsgskmwitnspiadvfvvw
akldedgrdeirgfilekgckglsapaihgkvglrasitgeivldeafvpeenilphvkg

Sequence, based on observed residues (ATOM records):

>d3ii9d1 e.6.1.0 (D:3-242) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
aatfhwddpllldqqladdermvrdaahayaqgklaprvteafrhettdaaifremgeig
llgptipeqyggpgldyvsygliarevervdsgyrsmmsvqsslvmvpifefgsdaqkek
ylpklatgewigcfgltepnpgsmvtrarkvpggyslsgskmwitnspiadvfvvwakld
edgrdeirgfilekgckglsapaihgkvglrasitgeivldeafvpeenilphvkg

Timeline for d3ii9d1:

• d3ii9d1 first appeared in SCOPe 2.03
  
• d3ii9d1 appears in SCOPe 2.05
  
• d3ii9d1 appears in the current release, SCOPe 2.08