SCOPe 2.03: Domain d3fkdd_: 3fkd D:

Lineage for d3fkdd_ (3fkd D:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (66 species)
   not a true protein

7. Species Porphyromonas gingivalis [TaxId:837] [225603] (1 PDB entry)

8. Domain d3fkdd_: 3fkd D: [209996]
   automated match to d3ftba_

Details for d3fkdd_

PDB Entry: 3fkd, 2.5 Å

PDB Description: the crystal structure of l-threonine-o-3-phosphate decarboxylase from porphyromonas gingivalis

PDB Compounds: (D:) L-Threonine-O-3-Phosphate Decarboxylase

SCOPe Domain Sequences for d3fkdd_:

Sequence, based on SEQRES records:

>d3fkdd_ c.67.1.0 (D:) automated matches {Porphyromonas gingivalis [TaxId: 837]}
sttvwtdgdkdhlekhlvenlncirhypepdagtlrqmlakrnsvdnnailvtngptaaf
yqiaqafrgsrsliaipsfaeyedacrmyehevcfypsnedigeadfsnmdfcwlcnpnn
pdgrllqrteilrllndhpdttfvldqsyvsftteevirpadikgrknlvmvysfshayg
ipglrigyivankdfmkrvaafstpwavnalaieaakfilihpaqftlpirkwqrntvdf
italnrldgvevhpsgttffllrlkkgtaaelkkymleeynmlirdasnfrgldesyvri
ttqrpaqnqlfikalet

Sequence, based on observed residues (ATOM records):

>d3fkdd_ c.67.1.0 (D:) automated matches {Porphyromonas gingivalis [TaxId: 837]}
sttvwtdgkdhlekhlvenlncirhypepdagtlrqmlakrnsvdnnailvtngptaafy
qiaqafrgsrsliaipsfaeyedacrmyehevcfypsnedigeadfsnmdfcwlcnpnnp
dgrllqrteilrllndhpdttfvldqsyvsftteevirpadikgrknlvmvysfshaygi
pglrigyivankdfmkrvaafstpwavnalaieaakfilihpaqftlpirkwqrntvdfi
talnrldgvevhpsgttffllrlkkgtaaelkknmlirdasnfrgldesyvrittqrpaq
nqlfikalet

Timeline for d3fkdd_:

• d3fkdd_ is new in SCOPe 2.03-stable
  
• d3fkdd_ appears in SCOPe 2.04
  
• d3fkdd_ appears in the current release, SCOPe 2.08