SCOPe 2.04: Domain d3d6bd2: 3d6b D:243-393

Lineage for d3d6bd2 (3d6b D:243-393)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.3: Acyl-CoA dehydrogenase C-terminal domain-like [47203] (3 families)
   multidomain flavoprotein; N-terminal domain is all-alpha; the middle domain is open (5,8) barrel

5. Family a.29.3.0: automated matches [227204] (1 protein)
   not a true family

6. Protein automated matches [226935] (18 species)
   not a true protein

7. Species Burkholderia pseudomallei [TaxId:320372] [225463] (6 PDB entries)

8. Domain d3d6bd2: 3d6b D:243-393 [209024]
   Other proteins in same PDB: d3d6ba1, d3d6bb1, d3d6bc1, d3d6bd1
   automated match to d1siqa1
   complexed with 54d

Details for d3d6bd2

PDB Entry: 3d6b, 2.21 Å

PDB Description: 2.2 a crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei

PDB Compounds: (D:) Glutaryl-CoA dehydrogenase

SCOPe Domain Sequences for d3d6bd2:

Sequence, based on SEQRES records:

>d3d6bd2 a.29.3.0 (D:243-393) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
lrgpftclnsarygiawgalgaaescwhiarqyvldrkqfgrplaanqliqkkladmqte
itlglqgvlrlgrmkdegtaaveitsimkrnscgkaldiarlardmlggngisdefgvar
hlvnlevvntyegthdihalilgraqtgiqa

Sequence, based on observed residues (ATOM records):

>d3d6bd2 a.29.3.0 (D:243-393) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
lrgpftclnsarygiawgalgaaescwhiarqyvldrkqfgrplaanqliqkkladmqte
itlglqgvlrlgrmkdegtaaveitsimkrnscgkaldiarlardmlggngvarhlvnle
vvntyehdihalilgraqtgiqa

Timeline for d3d6bd2:

• d3d6bd2 first appeared in SCOPe 2.03
  
• d3d6bd2 appears in SCOPe 2.05
  
• d3d6bd2 appears in the current release, SCOPe 2.08