SCOPe 2.06: Domain d3d5tb1: 3d5t B:3-156

Lineage for d3d5tb1 (3d5t B:3-156)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (239 species)
   not a true protein

7. Species Burkholderia pseudomallei [TaxId:320372] [188646] (7 PDB entries)

8. Domain d3d5tb1: 3d5t B:3-156 [209004]
   Other proteins in same PDB: d3d5ta2, d3d5tb2, d3d5tc2, d3d5td2
   automated match to d1b8pa1
   complexed with mg, na

Details for d3d5tb1

PDB Entry: 3d5t, 2.51 Å

PDB Description: crystal structure of malate dehydrogenase from burkholderia pseudomallei

PDB Compounds: (B:) malate dehydrogenase

SCOPe Domain Sequences for d3d5tb1:

Sequence, based on SEQRES records:

>d3d5tb1 c.2.1.0 (B:3-156) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
kpakrvavtgaagqiaysllfriangdllgkdqpvilqlldlpqaqaavkgvvmelddca
fpllagvvitddpkvafkdadvallvgarprskgmerkdllsanaeiftvqgaalnevas
rdvkvlvvgnpantnayiamksapdlpkknftam

Sequence, based on observed residues (ATOM records):

>d3d5tb1 c.2.1.0 (B:3-156) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
kpakrvavtgaagqiaysllfriangdllgkdqpvilqlldlpqaqaavkgvvmelddca
fpllagvvitddpkvafkdadvallvgarprsmerkdllsanaeiftvqgaalnevasrd
vkvlvvgnpantnayiamksapdlpkknftam

Timeline for d3d5tb1:

• d3d5tb1 first appeared in SCOPe 2.03
  
• d3d5tb1 appears in SCOPe 2.05
  
• d3d5tb1 appears in SCOPe 2.07
  
• d3d5tb1 appears in the current release, SCOPe 2.08