Lineage for d2yzmc2 (2yzm C:115-319)

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1432977Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 1432978Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (10 families) (S)
  5. 1433300Family d.142.1.0: automated matches [227184] (1 protein)
    not a true family
  6. 1433301Protein automated matches [226904] (18 species)
    not a true protein
  7. 1433357Species Thermus thermophilus [TaxId:300852] [225373] (6 PDB entries)
  8. 1433368Domain d2yzmc2: 2yzm C:115-319 [207754]
    Other proteins in same PDB: d2yzma1, d2yzmb1, d2yzmc1
    automated match to d1e4ea2
    complexed with dal

Details for d2yzmc2

PDB Entry: 2yzm (more details), 2.21 Å

PDB Description: structure of d-alanine:d-alanine ligase with substrate from thermus thermophilus hb8
PDB Compounds: (C:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d2yzmc2:

Sequence, based on SEQRES records: (download)

>d2yzmc2 d.142.1.0 (C:115-319) automated matches {Thermus thermophilus [TaxId: 300852]}

Sequence, based on observed residues (ATOM records): (download)

>d2yzmc2 d.142.1.0 (C:115-319) automated matches {Thermus thermophilus [TaxId: 300852]}

SCOPe Domain Coordinates for d2yzmc2:

Click to download the PDB-style file with coordinates for d2yzmc2.
(The format of our PDB-style files is described here.)

Timeline for d2yzmc2: