SCOPe 2.04: Domain d2yv1a1: 2yv1 A:7-127

Lineage for d2yv1a1 (2yv1 A:7-127)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.8: CoA-binding domain [51900] (6 proteins)

6. Protein Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain [51901] (5 species)

7. Species Methanocaldococcus jannaschii [TaxId:243232] [225349] (1 PDB entry)

8. Domain d2yv1a1: 2yv1 A:7-127 [207718]
   Other proteins in same PDB: d2yv1a2
   automated match to d1jkja1

Details for d2yv1a1

PDB Entry: 2yv1, 1.7 Å

PDB Description: Crystal Structure of Succinyl-CoA Synthetase Alpha Chain from Methanocaldococcus jannaschii DSM 2661

PDB Compounds: (A:) Succinyl-CoA ligase [ADP-forming] subunit alpha

SCOPe Domain Sequences for d2yv1a1:

Sequence; same for both SEQRES and ATOM records:

>d2yv1a1 c.2.1.8 (A:7-127) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Methanocaldococcus jannaschii [TaxId: 243232]}
milldentkaivqgitgrqgsfhtkkmlecgtkivggvtpgkggqnvhgvpvfdtvkeav
ketdanasvifvpapfakdavfeaidagielivvitehipvhdtmefvnyaedvgvkiig
p

Timeline for d2yv1a1:

• d2yv1a1 first appeared in SCOPe 2.03
  
• d2yv1a1 appears in SCOPe 2.05
  
• d2yv1a1 appears in the current release, SCOPe 2.08