Lineage for d2ynia2 (2yni A:430-558)

  1. Root: SCOPe 2.06
  2. 2089713Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2137193Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2139124Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2140276Family c.55.3.0: automated matches [191357] (1 protein)
    not a true family
  6. 2140277Protein automated matches [190396] (35 species)
    not a true protein
  7. 2140339Species Hiv-1 m:b_hxb2r [TaxId:11706] [225268] (21 PDB entries)
  8. 2140349Domain d2ynia2: 2yni A:430-558 [207679]
    Other proteins in same PDB: d2ynia1, d2ynia3, d2ynib_
    automated match to d1bqna1
    complexed with cxd, mg, tar

Details for d2ynia2

PDB Entry: 2yni (more details), 2.49 Å

PDB Description: HIV-1 Reverse Transcriptase in complex with inhibitor GSK952
PDB Compounds: (A:) Reverse transcriptase/ribonuclease H

SCOPe Domain Sequences for d2ynia2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2ynia2 c.55.3.0 (A:430-558) automated matches {Hiv-1 m:b_hxb2r [TaxId: 11706]}
ekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneqvd
klvsagirk

SCOPe Domain Coordinates for d2ynia2:

Click to download the PDB-style file with coordinates for d2ynia2.
(The format of our PDB-style files is described here.)

Timeline for d2ynia2:

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Domains from other chains:
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d2ynib_