Lineage for d1agfb_ (1agf B:)

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 218898Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 220405Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (9 proteins)
  6. 220417Protein Class I MHC, beta2-microglobulin and alpha-3 domain [48945] (20 species)
  7. 220545Species Human (Homo sapiens), HLA-B0801 [TaxId:9606] [48951] (6 PDB entries)
  8. 220551Domain d1agfb_: 1agf B: [20746]
    Other proteins in same PDB: d1agfa2
    mutant

Details for d1agfb_

PDB Entry: 1agf (more details), 2.2 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkrykl-5r mutation)
PDB Compounds: (B:)

SCOP Domain Sequences for d1agfb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1agfb_ b.1.1.2 (B:) Class I MHC, beta2-microglobulin and alpha-3 domain {Human (Homo sapiens), HLA-B0801}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

SCOP Domain Coordinates for d1agfb_:

Click to download the PDB-style file with coordinates for d1agfb_.
(The format of our PDB-style files is described here.)

Timeline for d1agfb_: