SCOP 1.71: Domain d1agdb_: 1agd B:

Lineage for d1agdb_ (1agd B:)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

6. Protein beta2-microglobulin [88600] (4 species)

7. Species Human (Homo sapiens) [TaxId:9606] [88602] (91 PDB entries)

8. Domain d1agdb_: 1agd B: [20742]
   Other proteins in same PDB: d1agda1, d1agda2

Details for d1agdb_

PDB Entry: 1agd, 2.05 Å

PDB Description: antagonist hiv-1 gag peptides induce structural changes in hla b8-hiv-1 gag peptide (ggkkkykl-index peptide)

SCOP Domain Sequences for d1agdb_:

Sequence; same for both SEQRES and ATOM records:

>d1agdb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)}
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

Timeline for d1agdb_:

• d1agdb_ first appeared (with stable ids) in SCOP 1.55, called d1agdb1
  
• d1agdb_ appears in SCOP 1.69
  
• d1agdb_ appears in SCOP 1.73
  
• d1agdb_ appears in the current release, SCOPe 2.08