SCOPe 2.04: Domain d2v6bc1: 2v6b C:22-164

Lineage for d2v6bc1 (2v6b C:22-164)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.0: automated matches [191313] (1 protein)
   not a true family

6. Protein automated matches [190069] (181 species)
   not a true protein

7. Species Deinococcus radiodurans [TaxId:1299] [225329] (1 PDB entry)

8. Domain d2v6bc1: 2v6b C:22-164 [206243]
   Other proteins in same PDB: d2v6ba2, d2v6bb2, d2v6bc2, d2v6bd2
   automated match to d1llda1

Details for d2v6bc1

PDB Entry: 2v6b, 2.5 Å

PDB Description: crystal structure of lactate dehydrogenase from deinococcus radiodurans (apo form)

PDB Compounds: (C:) l-lactate dehydrogenase

SCOPe Domain Sequences for d2v6bc1:

Sequence, based on SEQRES records:

>d2v6bc1 c.2.1.0 (C:22-164) automated matches {Deinococcus radiodurans [TaxId: 1299]}
mkvgvvgtgfvgstaafalvlrgscselvlvdrdedraqaeaediahaapvshgtrvwhg
ghseladaqvviltaganqkpgesrldlleknadifrelvpqitraapdavllvtsnpvd
lltdlatqlapgqpvigsg

Sequence, based on observed residues (ATOM records):

>d2v6bc1 c.2.1.0 (C:22-164) automated matches {Deinococcus radiodurans [TaxId: 1299]}
mkvgvvgtgfvgstaafalvlrgscselvlvdrdedraqaeaediahaapvshgtrvwhg
ghseladaqvviltagsrldlleknadifrelvpqitraapdavllvtsnpvdlltdlat
qlapgqpvigsg

Timeline for d2v6bc1:

• d2v6bc1 first appeared in SCOPe 2.03
  
• d2v6bc1 appears in SCOPe 2.05
  
• d2v6bc1 appears in the current release, SCOPe 2.08