Lineage for d2v65b1 (2v65 B:2-162)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2845793Family c.2.1.0: automated matches [191313] (1 protein)
    not a true family
  6. 2845794Protein automated matches [190069] (319 species)
    not a true protein
  7. 2846507Species Champsocephalus gunnari [TaxId:52237] [225331] (1 PDB entry)
  8. 2846509Domain d2v65b1: 2v65 B:2-162 [206237]
    Other proteins in same PDB: d2v65a2, d2v65b2
    automated match to d9ldta1

Details for d2v65b1

PDB Entry: 2v65 (more details), 2.35 Å

PDB Description: apo ldh from the psychrophile c. gunnari
PDB Compounds: (B:) L-lactate dehydrogenase A chain

SCOPe Domain Sequences for d2v65b1:

Sequence, based on SEQRES records: (download)

>d2v65b1 c.2.1.0 (B:2-162) automated matches {Champsocephalus gunnari [TaxId: 52237]}
stkeklishvmkeepvgsrskvtvvgvgmvgmasaisillkdlcdelamvdvmedklkge
vmdlqhgslflktkivgdkdysvtanskvvvvtagarqqegesrlnlvqrnvnifkfiip
nivkyspncilmvvsnpvdiltyvawklsgfprhrvig

Sequence, based on observed residues (ATOM records): (download)

>d2v65b1 c.2.1.0 (B:2-162) automated matches {Champsocephalus gunnari [TaxId: 52237]}
stkeklishvmkeepvgsrskvtvvgvgmvgmasaisillkdlcdelamvdvmedklkge
vmdlqhgslflktkivgdkdysvtanskvvvvtagaesrlnlvqrnvnifkfiipnivky
spncilmvvsnpvdiltyvawklsgfprhrvig

SCOPe Domain Coordinates for d2v65b1:

Click to download the PDB-style file with coordinates for d2v65b1.
(The format of our PDB-style files is described here.)

Timeline for d2v65b1:

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Domains from same chain:
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d2v65b2