Lineage for d1dqml1 (1dqm L:1-107)

  1. Root: SCOP 1.65
  2. 287094Class b: All beta proteins [48724] (126 folds)
  3. 287095Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 287096Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 287097Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (21 proteins)
  6. 287738Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogeneous CDRs are listed as engineered species
  7. 288075Species Mouse (Mus musculus), cluster 4 [TaxId:10090] [88531] (146 PDB entries)
  8. 288147Domain d1dqml1: 1dqm L:1-107 [20426]
    Other proteins in same PDB: d1dqmh1, d1dqmh2, d1dqml2
    part of anti-lysozyme Fab HYHEL-63

Details for d1dqml1

PDB Entry: 1dqm (more details), 2.1 Å

PDB Description: crystal structure of anti-lysozyme antibody

SCOP Domain Sequences for d1dqml1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1dqml1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 4}
divltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleik

SCOP Domain Coordinates for d1dqml1:

Click to download the PDB-style file with coordinates for d1dqml1.
(The format of our PDB-style files is described here.)

Timeline for d1dqml1:

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Domains from same chain:
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d1dqml2