Lineage for d15c8l1 (15c8 L:1-107)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2352460Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2352461Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2353665Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 2354171Species Mouse (Mus musculus), cluster 3.1 [TaxId:10090] [88527] (13 PDB entries)
  8. 2354176Domain d15c8l1: 15c8 L:1-107 [20300]
    Other proteins in same PDB: d15c8h1, d15c8h2, d15c8l2
    part of catalytic Fab 5C8

Details for d15c8l1

PDB Entry: 15c8 (more details), 2.5 Å

PDB Description: catalytic antibody 5c8, free fab
PDB Compounds: (L:) igg 5c8 fab (light chain)

SCOPe Domain Sequences for d15c8l1:

Sequence; same for both SEQRES and ATOM records: (download)

>d15c8l1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]}
divltqspaimsaslgervtmtctasssvsssnlhwyqqkpgsspklwiystsnlasgvp
arfsgsgsgtsysltissmeaedaatyychqyhrspytfgggtkleik

SCOPe Domain Coordinates for d15c8l1:

Click to download the PDB-style file with coordinates for d15c8l1.
(The format of our PDB-style files is described here.)

Timeline for d15c8l1:

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Domains from same chain:
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d15c8l2