SCOPe 2.08: Domain d4jsqv_: 4jsq V:

Lineage for d4jsqv_ (4jsq V:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies)
   4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing

4. Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (8 families)
   N-terminal residue provides two catalytic groups, nucleophile and proton donor

5. Family d.153.1.4: Proteasome subunits [56251] (4 proteins)

6. Protein automated matches [190144] (14 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [187078] (41 PDB entries)

8. Domain d4jsqv_: 4jsq V: [202771]
   Other proteins in same PDB: d4jsqa_, d4jsqc2, d4jsqe_, d4jsqi_, d4jsqj_, d4jsqk_, d4jsql_, d4jsqm_, d4jsqn_, d4jsqo_, d4jsqq2, d4jsqs_, d4jsqw_, d4jsqx_, d4jsqy_, d4jsqz_
   automated match to d2zcyh_
   complexed with mes

Details for d4jsqv_

PDB Entry: 4jsq, 2.8 Å

PDB Description: Yeast 20S proteasome in complex with the dimerized linear mimetic of TMC-95A - yCP:4e

PDB Compounds: (V:) Proteasome subunit beta type-2

SCOPe Domain Sequences for d4jsqv_:

Sequence; same for both SEQRES and ATOM records:

>d4jsqv_ d.153.1.4 (V:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
ttivgvkfnngvviaadtrstqgpivadkncaklhrispkiwcagagtaadteavtqlig
snielhslytsreprvvsalqmlkqhlfkyqghigaylivagvdptgshlfsihahgstd
vgyylslgsgslaamavleshwkqdltkeeaiklasdaiqagiwndlgsgsnvdvcvmei
gkdaeylrnyltpnvreekqksykfprgttavlkesivnicd

Timeline for d4jsqv_:

• d4jsqv_ first appeared in SCOPe 2.03
  
• d4jsqv_ appears in SCOPe 2.07