Lineage for d4i6nd_ (4i6n D:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2501110Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 2501111Superfamily d.15.1: Ubiquitin-like [54236] (11 families) (S)
  5. 2501112Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 2501389Protein Ubiquitin [54238] (9 species)
  7. 2501491Species Human (Homo sapiens) [TaxId:9606] [54239] (265 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 2501521Domain d4i6nd_: 4i6n D: [202578]
    Other proteins in same PDB: d4i6na1, d4i6na2, d4i6nc1, d4i6nc2
    automated match to d1xd3b_
    complexed with dtt, gve, na

Details for d4i6nd_

PDB Entry: 4i6n (more details), 1.7 Å

PDB Description: Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl ester
PDB Compounds: (D:) Ubiquitin

SCOPe Domain Sequences for d4i6nd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4i6nd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4i6nd_:

Click to download the PDB-style file with coordinates for d4i6nd_.
(The format of our PDB-style files is described here.)

Timeline for d4i6nd_: