Lineage for d4fjvd_ (4fjv D:)

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1892544Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1892545Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1892546Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1892778Protein Ubiquitin [54238] (7 species)
  7. 1892856Species Human (Homo sapiens) [TaxId:9606] [54239] (149 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1892937Domain d4fjvd_: 4fjv D: [202038]
    Other proteins in same PDB: d4fjva_, d4fjvc_
    automated match to d4fjvb_
    complexed with gol, neh

Details for d4fjvd_

PDB Entry: 4fjv (more details), 2.05 Å

PDB Description: Crystal Structure of Human Otubain2 and Ubiquitin Complex
PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d4fjvd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4fjvd_ d.15.1.1 (D:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
dvpdyahmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledg
rtlsdyniqkestlhlvlrlrg

SCOPe Domain Coordinates for d4fjvd_:

Click to download the PDB-style file with coordinates for d4fjvd_.
(The format of our PDB-style files is described here.)

Timeline for d4fjvd_: