SCOPe 2.08: Domain d4fjvd1: 4fjv D:1-75

Lineage for d4fjvd1 (4fjv D:1-75)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (15 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (9 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (312 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d4fjvd1: 4fjv D:1-75 [202038]
   Other proteins in same PDB: d4fjva1, d4fjva2, d4fjvb2, d4fjvc_, d4fjvd2
   automated match to d4fjvb_
   complexed with gol, neh

Details for d4fjvd1

PDB Entry: 4fjv, 2.05 Å

PDB Description: Crystal Structure of Human Otubain2 and Ubiquitin Complex

PDB Compounds: (D:) Polyubiquitin-C

SCOPe Domain Sequences for d4fjvd1:

Sequence; same for both SEQRES and ATOM records:

>d4fjvd1 d.15.1.1 (D:1-75) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

Timeline for d4fjvd1:

• d4fjvd1 first appeared in SCOPe 2.03, called d4fjvd_
  
• d4fjvd1 appears in SCOPe 2.07