SCOPe 2.03: Domain d4en3c1: 4en3 C:8-183

Lineage for d4en3c1 (4en3 C:8-183)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
   dimeric

4. Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families)

5. Family d.19.1.1: MHC antigen-recognition domain [54453] (13 proteins)

6. Protein CD1, alpha-1 and alpha-2 domains [54456] (5 species)
   Class I MHC-related

7. Species Human (Homo sapiens), CD1a [TaxId:9606] [102838] (8 PDB entries)

8. Domain d4en3c1: 4en3 C:8-183 [201882]
   Other proteins in same PDB: d4en3a1, d4en3a2, d4en3b1, d4en3b2, d4en3c2, d4en3d_
   automated match to d1onqa2
   complexed with agh, fuc, gol, nag

Details for d4en3c1

PDB Entry: 4en3, 2.57 Å

PDB Description: crystal structure of a human valpha24(-) nkt tcr in complex with cd1d/alpha-galactosylceramide

PDB Compounds: (C:) Antigen-presenting glycoprotein CD1d

SCOPe Domain Sequences for d4en3c1:

Sequence, based on SEQRES records:

>d4en3c1 d.19.1.1 (C:8-183) CD1, alpha-1 and alpha-2 domains {Human (Homo sapiens), CD1a [TaxId: 9606]}
fplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwetlq
hifrvyrssftrdvkefakmlrlsyplelqvsagcevhpgnasnnffhvafqgkdilsfq
gtsweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkk

Sequence, based on observed residues (ATOM records):

>d4en3c1 d.19.1.1 (C:8-183) CD1, alpha-1 and alpha-2 domains {Human (Homo sapiens), CD1a [TaxId: 9606]}
fplrclqissfansswtrtdglawlgelqthswsndsdtvrslkpwsqgtfsdqqwetlq
hifrvyrssftrdvkefakmlrlsyplelqvsagcevhpasnnffhvafqgkdilsfqgt
sweptqeaplwvnlaiqvlnqdkwtretvqwllngtcpqfvsgllesgkselkk

Timeline for d4en3c1:

• d4en3c1 is new in SCOPe 2.03-stable
  
• d4en3c1 appears in SCOPe 2.04
  
• d4en3c1 appears in the current release, SCOPe 2.08