SCOPe 2.03: Domain d1mf2m1: 1mf2 M:1-107

Lineage for d1mf2m1 (1mf2 M:1-107)

Root: SCOPe 2.03
Class b: All beta proteins [48724] (174 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.1: Immunoglobulin [48726] (5 families)
Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)

Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

Species Mouse (Mus musculus), cluster 2 [TaxId:10090] [88526] (30 PDB entries)
Domain d1mf2m1: 1mf2 M:1-107 [20176]
Other proteins in same PDB: d1mf2h1, d1mf2h2, d1mf2l2, d1mf2m2, d1mf2n1, d1mf2n2
part of Fab F11.2.32 against HIV-1 protease

Details for d1mf2m1

PDB Entry: 1mf2 (more details), 2.6 Å

PDB Description: anti hiv1 protease fab complex

PDB Compounds: (M:) monoclonal antibody f11.2.32

SCOPe Domain Sequences for d1mf2m1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mf2m1 b.1.1.1 (M:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 2 [TaxId: 10090]}
dtvltqspaslavslgqratiscrasesvdyygksfmnwfqqkpgqppklliyaasnqgs
gvparfsgsgsgtdfslhihpmeeddsamyfcqqskevpwtfgggtkleik

SCOPe Domain Coordinates for d1mf2m1:

Click to download the PDB-style file with coordinates for d1mf2m1.
(The format of our PDB-style files is described here.)

Timeline for d1mf2m1: