Lineage for d1hyyl1 (1hyy L:1-107)

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 218898Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 218899Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (15 proteins)
  6. 218958Protein Immunoglobulin (variable domains of L and H chains) [48749] (228 species)
  7. 219525Species Fab 6D9 (mouse), kappa L chain [48833] (2 PDB entries)
    hydrolytic antibody
  8. 219529Domain d1hyyl1: 1hyy L:1-107 [20168]
    Other proteins in same PDB: d1hyyh2, d1hyyl2

Details for d1hyyl1

PDB Entry: 1hyy (more details), 1.8 Å

PDB Description: crystal form ii: high resolution crystal structure of the complex of the hydrolytic antibody fab 6d9 and a transition-state analog

SCOP Domain Sequences for d1hyyl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1hyyl1 b.1.1.1 (L:1-107) Immunoglobulin (variable domains of L and H chains) {Fab 6D9 (mouse), kappa L chain}
elvmtqtplslpvslgdqasiscrssqtivhsngdtyldwflqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgvyycfqgshvpptfgggtkleik

SCOP Domain Coordinates for d1hyyl1:

Click to download the PDB-style file with coordinates for d1hyyl1.
(The format of our PDB-style files is described here.)

Timeline for d1hyyl1:

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Domains from same chain:
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d1hyyl2