Lineage for d1yedb1 (1yed B:1-113)

  1. Root: SCOP 1.59
  2. 101936Class b: All beta proteins [48724] (110 folds)
  3. 101937Fold b.1: Immunoglobulin-like beta-sandwich [48725] (15 superfamilies)
  4. 101938Superfamily b.1.1: Immunoglobulin [48726] (6 families) (S)
  5. 101939Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (14 proteins)
  6. 101995Protein Immunoglobulin (variable domains of L and H chains) [48749] (205 species)
  7. 102652Species Fab D2.4 (mouse), kappa L chain [48830] (1 PDB entry)
  8. 102654Domain d1yedb1: 1yed B:1-113 [20151]
    Other proteins in same PDB: d1yeda2, d1yedb2, d1yedh2, d1yedl2

Details for d1yedb1

PDB Entry: 1yed (more details), 3.1 Å

PDB Description: structure of a catalytic antibody igg2a fab fragment (d2.4)

SCOP Domain Sequences for d1yedb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yedb1 b.1.1.1 (B:1-113) Immunoglobulin (variable domains of L and H chains) {Fab D2.4 (mouse), kappa L chain}
avklqqsgpelvrpgtsvklscktsgyiftsywihwlkqssgqglewiariypgtggtyy
nekfkgkatltadkssstaymqlsslksedsavyfctrwgfttvrenyyamdywgqgtlv
tvss

SCOP Domain Coordinates for d1yedb1:

Click to download the PDB-style file with coordinates for d1yedb1.
(The format of our PDB-style files is described here.)

Timeline for d1yedb1: