Lineage for d1mpah1 (1mpa H:1-121)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652160Protein Immunoglobulin heavy chain variable domain, VH [88543] (20 species)
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 652563Species Mouse (Mus musculus), cluster 3.2 [TaxId:10090] [88552] (148 PDB entries)
  8. 652666Domain d1mpah1: 1mpa H:1-121 [20135]
    Other proteins in same PDB: d1mpah2, d1mpal1, d1mpal2
    part of bactericidal Fab MN12H2 against Neisseria meningitidis
    complexed with cd, cyf, thc

Details for d1mpah1

PDB Entry: 1mpa (more details), 2.6 Å

PDB Description: bactericidal antibody against neisseria meningitidis
PDB Compounds: (H:) mn12h2 igg2a-kappa

SCOP Domain Sequences for d1mpah1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1mpah1 b.1.1.1 (H:1-121) Immunoglobulin heavy chain variable domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
evnlqqsgtvlarpgasvrmsckasgysftsywlhwikqrpgqglewiggiypgnrdtry
tqrfkdkakltavtsantaymelssltnedsavyycsiiyfdyadfimdywgqgttvtvs
s

SCOP Domain Coordinates for d1mpah1:

Click to download the PDB-style file with coordinates for d1mpah1.
(The format of our PDB-style files is described here.)

Timeline for d1mpah1:

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Domains from same chain:
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d1mpah2