SCOPe 2.08: Domain d3ze9b_: 3ze9 B:

Lineage for d3ze9b_ (3ze9 B:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (8 species)
   not a true protein

7. Species Desulfovibrio vulgaris [TaxId:882] [189199] (13 PDB entries)

8. Domain d3ze9b_: 3ze9 B: [201311]
   Other proteins in same PDB: d3ze9a_
   automated match to d3ze6b_
   complexed with cl, fco, fe2, fsx, ni, sf4

Details for d3ze9b_

PDB Entry: 3ze9, 1.33 Å

PDB Description: 3d structure of the nifese hydrogenase from d. vulgaris hildenborough in the oxidized as-isolated state at 1.33 angstroms

PDB Compounds: (B:) periplasmic [nifese] hydrogenase, large subunit, selenocysteine-containing

SCOPe Domain Sequences for d3ze9b_:

Sequence; same for both SEQRES and ATOM records:

>d3ze9b_ e.18.1.1 (B:) automated matches {Desulfovibrio vulgaris [TaxId: 882]}
grttiaidpvtrieghlkaevvvengkvvdarlsggmyrgfetilrgrdprdasqivqri
cgvcptahstasvlaldeafgakvpnngritrnlifganylqshilhfyhlsaqdfvqgp
dtapfvprfpksdlrlskelnkagvdqyiealevrrichemvalfggrmphvqgqvvgga
teiptkeklveyaarfkkvrdfveqkyvpvvytigskykdmfkvgqgfkaalcvgafpld
nsgkkhlfmpgvyakgkdmpfdpskikeyvkyswfaeettglnykegktipapdkagays
fvkaprydglslevgplarmwvnnpelspvgkkllkdlfgisakkfrdlgeeaafslmgr
hvaraeetyymlgaiegwlkeikagedtvvmpavpasaegtgfteaprgsllhyvkvkds
kidnyqivsaslwncnprddmgqrgaveealigipvddiqnpvnvarlirafdpxlgcav
h

Timeline for d3ze9b_:

• d3ze9b_ first appeared in SCOPe 2.03
  
• d3ze9b_ appears in SCOPe 2.07