Lineage for d1nldl1 (1nld L:1-107)

  1. Root: SCOP 1.59
  2. 101936Class b: All beta proteins [48724] (110 folds)
  3. 101937Fold b.1: Immunoglobulin-like beta-sandwich [48725] (15 superfamilies)
  4. 101938Superfamily b.1.1: Immunoglobulin [48726] (6 families) (S)
  5. 101939Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (14 proteins)
  6. 101995Protein Immunoglobulin (variable domains of L and H chains) [48749] (205 species)
  7. 102343Species Fab 1583, against an epitope of gp41 of HIV-1, (mouse), kappa L chain [48818] (1 PDB entry)
  8. 102345Domain d1nldl1: 1nld L:1-107 [20110]
    Other proteins in same PDB: d1nldh2, d1nldl2

Details for d1nldl1

PDB Entry: 1nld (more details), 2.9 Å

PDB Description: fab fragment of a neutralizing antibody directed against an epitope of gp41 from hiv-1

SCOP Domain Sequences for d1nldl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1nldl1 b.1.1.1 (L:1-107) Immunoglobulin (variable domains of L and H chains) {Fab 1583, against an epitope of gp41 of HIV-1, (mouse), kappa L chain}
dvvmtqtpltlsvtigqpasisckssqslldsdgktylnwllqrpgqspkrliylvskld
sgvpdrftgsgsgtdftlkisrveaedlgvyycwqgthfprtfgggtkleik

SCOP Domain Coordinates for d1nldl1:

Click to download the PDB-style file with coordinates for d1nldl1.
(The format of our PDB-style files is described here.)

Timeline for d1nldl1:

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Domains from same chain:
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d1nldl2