Lineage for d3scmc2 (3scm C:118-204)

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1510240Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1510241Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1513476Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1517226Protein automated matches [190374] (9 species)
    not a true protein
  7. 1517994Species Mouse (Mus musculus) [TaxId:10090] [224855] (343 PDB entries)
  8. 1518384Domain d3scmc2: 3scm C:118-204 [200609]
    Other proteins in same PDB: d3scma1, d3scma2, d3scmb_, d3scmc1, d3scmd1
    automated match to d1qrnd2
    complexed with lgn, nag

Details for d3scmc2

PDB Entry: 3scm (more details), 2.5 Å

PDB Description: crystal structure of autoreactive-valpha14-vbeta6 nkt tcr in complex with cd1d-isoglobotrihexosylceramide
PDB Compounds: (C:) NKT TCR Valpha14 chain

SCOPe Domain Sequences for d3scmc2:

Sequence, based on SEQRES records: (download)

>d3scmc2 b.1.1.2 (C:118-204) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
iqnpdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksns
avawsnksdfacanafnnsiipedtff

Sequence, based on observed residues (ATOM records): (download)

>d3scmc2 b.1.1.2 (C:118-204) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
iqnpdpavyqlrdskssdclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsava
wsacanafnnipedtff

SCOPe Domain Coordinates for d3scmc2:

Click to download the PDB-style file with coordinates for d3scmc2.
(The format of our PDB-style files is described here.)

Timeline for d3scmc2: