Lineage for d3rugh2 (3rug H:129-256)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1287434Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1290587Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)
  6. 1294263Protein automated matches [190374] (12 species)
    not a true protein
  7. 1294862Species Mouse (Mus musculus) [TaxId:10090] [224855] (237 PDB entries)
  8. 1295029Domain d3rugh2: 3rug H:129-256 [200534]
    Other proteins in same PDB: d3ruga1, d3rugb_, d3rugc1, d3rugd_, d3ruge1, d3rugf1, d3rugg1, d3rugh1
    automated match to d1ktke2
    complexed with db6, nag

Details for d3rugh2

PDB Entry: 3rug (more details), 2.2 Å

PDB Description: Crystal structure of Valpha10-Vbeta8.1 NKT TCR in complex with CD1d-alphaglucosylceramide (C20:2)
PDB Compounds: (H:) Vbeta8.1(mouse variable domain, human constant domain)

SCOPe Domain Sequences for d3rugh2:

Sequence, based on SEQRES records: (download)

>d3rugh2 b.1.1.2 (H:129-256) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
dlknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpq
plkeqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqiv
saeawgra

Sequence, based on observed residues (ATOM records): (download)

>d3rugh2 b.1.1.2 (H:129-256) automated matches {Mouse (Mus musculus) [TaxId: 10090]}
dlknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpq
plkeqpalsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsa
eawgra

SCOPe Domain Coordinates for d3rugh2:

Click to download the PDB-style file with coordinates for d3rugh2.
(The format of our PDB-style files is described here.)

Timeline for d3rugh2: