SCOPe 2.08: Domain d3n4ma2: 3n4m A:138-209

Lineage for d3n4ma2 (3n4m A:138-209)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.4: CAP C-terminal domain-like [46796] (9 proteins)

6. Protein Catabolite gene activator protein (CAP), C-terminal domain [46797] (1 species)
   N-terminal domain has double beta-helix fold

7. Species Escherichia coli [TaxId:562] [46798] (28 PDB entries)

8. Domain d3n4ma2: 3n4m A:138-209 [199932]
   Other proteins in same PDB: d3n4ma1, d3n4mb_, d3n4mc_
   automated match to d1i5zb1
   protein/DNA complex; protein/RNA complex; complexed with cmp, peg

Details for d3n4ma2

PDB Entry: 3n4m, 2.99 Å

PDB Description: e. coli rna polymerase alpha subunit c-terminal domain in complex with cap and dna

PDB Compounds: (A:) Catabolite gene activator

SCOPe Domain Sequences for d3n4ma2:

Sequence; same for both SEQRES and ATOM records:

>d3n4ma2 a.4.5.4 (A:138-209) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
dvtgriaqtllnlakqpdamthpdgmqikitrqeigqivgcsretvgrilkmledqnlis
ahgktivvygtr

Timeline for d3n4ma2:

• d3n4ma2 first appeared in SCOPe 2.03
  
• d3n4ma2 appears in SCOPe 2.07