SCOPe 2.03: Domain d3axmf1: 3axm F:12-150

Lineage for d3axmf1 (3axm F:12-150)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (12 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [117976] (3 PDB entries)
   Uniprot P12089

8. Domain d3axmf1: 3axm F:12-150 [198960]
   Other proteins in same PDB: d3axma2, d3axmb2, d3axmc2, d3axmd2, d3axme2, d3axmf2, d3axmg2, d3axmh2, d3axms_, d3axmt_, d3axmu_, d3axmv_, d3axmw_, d3axmx_, d3axmy_, d3axmz_
   automated match to d1wdda2
   complexed with 6pg, mg

Details for d3axmf1

PDB Entry: 3axm, 1.65 Å

PDB Description: Structure of rice Rubisco in complex with 6PG

PDB Compounds: (F:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d3axmf1:

Sequence, based on SEQRES records:

>d3axmf1 d.58.9.1 (F:12-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
gfkagvkdykltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwt
dgltsldrykgrcyhiepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalr
alrledlripptysktfqg

Sequence, based on observed residues (ATOM records):

>d3axmf1 d.58.9.1 (F:12-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
gfkagvkltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwtdgl
tsldrykgrcyhiepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalralr
ledlripptysktfqg

Timeline for d3axmf1:

• d3axmf1 is new in SCOPe 2.03-stable
  
• d3axmf1 appears in SCOPe 2.04
  
• d3axmf1 appears in the current release, SCOPe 2.08