SCOPe 2.06: Domain d3axkb1: 3axk B:21-150

Lineage for d3axkb1 (3axk B:21-150)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.9: RuBisCO, large subunit, small (N-terminal) domain [54966] (2 families)
   C-terminal domain is beta/alpha barrel

5. Family d.58.9.1: Ribulose 1,5-bisphosphate carboxylase-oxygenase [54967] (1 protein)

6. Protein Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968] (12 species)

7. Species Rice (Oryza sativa) [TaxId:4530] [117976] (3 PDB entries)
   Uniprot P12089

8. Domain d3axkb1: 3axk B:21-150 [198948]
   Other proteins in same PDB: d3axka2, d3axkb2, d3axks_, d3axkt_
   automated match to d1wdda2
   complexed with gol, mg, ndp

Details for d3axkb1

PDB Entry: 3axk, 1.9 Å

PDB Description: Structure of rice Rubisco in complex with NADP(H)

PDB Compounds: (B:) ribulose bisphosphate carboxylase large chain

SCOPe Domain Sequences for d3axkb1:

Sequence, based on SEQRES records:

>d3axkb1 d.58.9.1 (B:21-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
kltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstgtwttvwtdgltsldry
kgrcyhiepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalralrledlri
pptysktfqg

Sequence, based on observed residues (ATOM records):

>d3axkb1 d.58.9.1 (B:21-150) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]}
kltyytpeyetkdtdilaafrvtpqpgvppeeagaavaaesstwtdgltsldrykgrcyh
iepvvgednqyiayvaypldlfeegsvtnmftsivgnvfgfkalralrledlripptysk
tfqg

Timeline for d3axkb1:

• d3axkb1 first appeared in SCOPe 2.03
  
• d3axkb1 appears in SCOPe 2.05
  
• d3axkb1 appears in SCOPe 2.07
  
• d3axkb1 appears in the current release, SCOPe 2.08