Lineage for d2fbjl1 (2fbj L:1-109)

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1755446Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1755447Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1755448Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1756616Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 1757204Species Mouse (Mus musculus), cluster 3.4 [TaxId:10090] [88530] (4 PDB entries)
  8. 1757207Domain d2fbjl1: 2fbj L:1-109 [19850]
    Other proteins in same PDB: d2fbjh1, d2fbjh2, d2fbjl2
    part of Fab J539
    complexed with zn

Details for d2fbjl1

PDB Entry: 2fbj (more details), 1.95 Å

PDB Description: refined crystal structure of the galactan-binding immunoglobulin fab j539 at 1.95-angstroms resolution
PDB Compounds: (L:) iga-kappa j539 fab (light chain)

SCOPe Domain Sequences for d2fbjl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fbjl1 b.1.1.1 (L:1-109) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 3.4 [TaxId: 10090]}

SCOPe Domain Coordinates for d2fbjl1:

Click to download the PDB-style file with coordinates for d2fbjl1.
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Timeline for d2fbjl1:

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