Lineage for d1igil1 (1igi L:1-107)

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 651988Superfamily b.1.1: Immunoglobulin [48726] (4 families) (S)
  5. 651989Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (29 proteins)
  6. 652980Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 653172Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (127 PDB entries)
  8. 653277Domain d1igil1: 1igi L:1-107 [19822]
    Other proteins in same PDB: d1igih1, d1igih2, d1igil2
    part of Fab 26-10

Details for d1igil1

PDB Entry: 1igi (more details), 2.7 Å

PDB Description: 26-10 fab:digoxin complex-affinity and specificity due to surface complementarity
PDB Compounds: (L:) igg2a-kappa 26-10 fab (light chain)

SCOP Domain Sequences for d1igil1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1igil1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]}
dvvmtqtplslpvslgdqasiscrssqslvhsngntylnwylqkagqspklliykvsnrf
sgvpdrfsgsgsgtdftlkisrveaedlgiyfcsqtthvpptfgggtkleik

SCOP Domain Coordinates for d1igil1:

Click to download the PDB-style file with coordinates for d1igil1.
(The format of our PDB-style files is described here.)

Timeline for d1igil1:

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Domains from same chain:
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d1igil2