SCOP 1.71: Domain d1dbbl1: 1dbb L:1-107

Lineage for d1dbbl1 (1dbb L:1-107)

1. Root: SCOP 1.71

2. Class b: All beta proteins [48724] (149 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (25 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (28 proteins)

6. Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (14 species)
   VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species

7. Species Mouse (Mus musculus), cluster 1.1 [TaxId:10090] [88524] (126 PDB entries)

8. Domain d1dbbl1: 1dbb L:1-107 [19798]
   Other proteins in same PDB: d1dbbh1, d1dbbh2, d1dbbl2
   part of Fab DB3
   complexed with str

Details for d1dbbl1

PDB Entry: 1dbb, 2.7 Å

PDB Description: three-dimensional structure of an anti-steroid fab' and progesterone-fab' complex

SCOP Domain Sequences for d1dbbl1:

Sequence; same for both SEQRES and ATOM records:

>d1dbbl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.1}
dvvmtqiplslpvnlgdqasiscrssqslihsngntylhwylqkpgqspkllmykvsnrf
ygvpdrfsgsgsgtdftlkisrveaedlgiyfcsqsshvpptfgggtkleik

Timeline for d1dbbl1:

• d1dbbl1 first appeared (with stable ids) in SCOP 1.55
  
• d1dbbl1 appears in SCOP 1.69
  
• d1dbbl1 appears in SCOP 1.73
  
• d1dbbl1 appears in the current release, SCOPe 2.08