Lineage for d1ifhl1 (1ifh L:1-108)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1287434Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1287435Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 1288590Protein Immunoglobulin light chain kappa variable domain, VL-kappa [88519] (16 species)
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. 1288992Species Mouse (Mus musculus), cluster 1.2 [TaxId:10090] [88525] (46 PDB entries)
  8. 1289038Domain d1ifhl1: 1ifh L:1-108 [19790]
    Other proteins in same PDB: d1ifhh1, d1ifhh2, d1ifhl2
    part of Fab 17/9

Details for d1ifhl1

PDB Entry: 1ifh (more details), 2.8 Å

PDB Description: a detailed analysis of the free and bound conformation of an antibody: x-ray structures of anti-peptide fab 17(slash)9 and three different fab-peptide complexes
PDB Compounds: (L:) igg2a-kappa 17/9 fab (light chain)

SCOPe Domain Sequences for d1ifhl1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ifhl1 b.1.1.1 (L:1-108) Immunoglobulin light chain kappa variable domain, VL-kappa {Mouse (Mus musculus), cluster 1.2 [TaxId: 10090]}
divmtqspssltvtagekvtmsctssqslfnsgkqknyltwyqqkpgqppkvliywastr
esgvpdrftgsgsgtdftltissvqaedlavyycqndysnpltfgggtklelkr

SCOPe Domain Coordinates for d1ifhl1:

Click to download the PDB-style file with coordinates for d1ifhl1.
(The format of our PDB-style files is described here.)

Timeline for d1ifhl1:

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Domains from same chain:
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d1ifhl2