SCOPe 2.02: Domain d3zeab_: 3zea B:

Lineage for d3zeab_ (3zea B:)

1. Root: SCOPe 2.02

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.1: Nickel-iron hydrogenase, large subunit [56763] (2 proteins)

6. Protein automated matches [190109] (4 species)
   not a true protein

7. Species Desulfovibrio vulgaris [TaxId:882] [189199] (4 PDB entries)

8. Domain d3zeab_: 3zea B: [197356]
   Other proteins in same PDB: d3zeaa_
   automated match to d2wpnb_
   complexed with fco, fe2, h2s, ni, sf4

Details for d3zeab_

PDB Entry: 3zea, 1.82 Å

PDB Description: 3d structure of the nifese hydrogenase from d. vulgaris hildenborough in the reduced state at 1.82 angstroms

PDB Compounds: (B:) periplasmic [nifese] hydrogenase, large subunit, selenocysteine-containing

SCOPe Domain Sequences for d3zeab_:

Sequence; same for both SEQRES and ATOM records:

>d3zeab_ e.18.1.1 (B:) automated matches {Desulfovibrio vulgaris [TaxId: 882]}
grttiaidpvtrieghlkaevvvengkvvdarlsggmyrgfetilrgrdprdasqivqri
cgvcptahstasvlaldeafgakvpnngritrnlifganylqshilhfyhlsaqdfvqgp
dtapfvprfpksdlrlskelnkagvdqyiealevrrichemvalfggrmphvqgqvvgga
teiptkeklveyaarfkkvrdfveqkyvpvvytigskykdmfkvgqgfkaalcvgafpld
nsgkkhlfmpgvyakgkdmpfdpskikeyvkyswfaeettglnykegktipapdkagays
fvkaprydglslevgplarmwvnnpelspvgkkllkdlfgisakkfrdlgeeaafslmgr
hvaraeetyymlgaiegwlkeikagedtvvmpavpasaegtgfteaprgsllhyvkvkds
kidnyqivsaslwncnprddmgqrgaveealigipvddiqnpvnvarlirafdpclgcav
h

Timeline for d3zeab_:

• d3zeab_ is new in SCOPe 2.02-stable
  
• d3zeab_ appears in SCOPe 2.03
  
• d3zeab_ appears in the current release, SCOPe 2.08