Lineage for d4i6nb_ (4i6n B:)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1637451Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1637452Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1637453Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1637639Protein Ubiquitin [54238] (7 species)
  7. 1637706Species Human (Homo sapiens) [TaxId:9606] [54239] (126 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1637731Domain d4i6nb_: 4i6n B: [197189]
    Other proteins in same PDB: d4i6na_, d4i6nc_
    automated match to d3noba_
    complexed with dtt, gve, na

Details for d4i6nb_

PDB Entry: 4i6n (more details), 1.7 Å

PDB Description: Crystal structure of Trichinella spiralis UCH37 catalytic domain bound to Ubiquitin vinyl methyl ester
PDB Compounds: (B:) Ubiquitin

SCOPe Domain Sequences for d4i6nb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4i6nb_ d.15.1.1 (B:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg

SCOPe Domain Coordinates for d4i6nb_:

Click to download the PDB-style file with coordinates for d4i6nb_.
(The format of our PDB-style files is described here.)

Timeline for d4i6nb_: