Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2127984Fold c.60: Phosphoglycerate mutase-like [53253] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 324156; strand 5 is antiparallel to the rest
  4. 2127985Superfamily c.60.1: Phosphoglycerate mutase-like [53254] (4 families) (S)
  5. 2128215Family c.60.1.0: automated matches [196988] (1 protein)
    not a true family
  6. 2128216Protein automated matches [196989] (10 species)
    not a true protein

Species:

  1. 2128217Hafnia alvei [TaxId:569] [196990] (3 PDB entries)
    1. Domain for 4aro:
    2. Domain for 4ars:
    3. Domain for 4aru:
  2. 2128221Hydrogenobacter thermophilus [TaxId:608538] [226622] (2 PDB entries)
    1. Domains for 4ij5:
      1. 2128222Domain d4ij5a_: 4ij5 A: [223217]
        automated match to d3d8ha_
        complexed with cl, edo
      2. 2128223Domain d4ij5b_: 4ij5 B: [223218]
        automated match to d3d8ha_
        complexed with cl, edo
    2. Domains for 4ij6:
      1. 2128224Domain d4ij6a_: 4ij6 A: [223219]
        automated match to d3d8ha_
        complexed with cl, edo, sep; mutant
      2. 2128225Domain d4ij6b_: 4ij6 B: [223220]
        automated match to d3d8ha_
        complexed with cl, edo, sep; mutant
  3. 2128226Klebsiella pneumoniae [TaxId:573] [225887] (3 PDB entries)
    1. Domains for 2wnh:
      1. 2128227Domain d2wnha1: 2wnh A:13-405 [206898]
        Other proteins in same PDB: d2wnha2, d2wnha3, d2wnhb2, d2wnhb3
        automated match to d1dkla_
        complexed with gol, mg, na
      2. 2128228Domain d2wnhb1: 2wnh B:13-405 [206899]
        Other proteins in same PDB: d2wnha2, d2wnha3, d2wnhb2, d2wnhb3
        automated match to d1dkla_
        complexed with gol, mg, na
    2. Domains for 2wni:
      1. 2128233Domain d2wnia1: 2wni A:13-405 [206900]
        Other proteins in same PDB: d2wnia2, d2wnia3, d2wnib2, d2wnic2, d2wnic3, d2wnid2
        automated match to d1dkla_
        complexed with so4
      2. 2128234Domain d2wnib1: 2wni B:13-405 [206901]
        Other proteins in same PDB: d2wnia2, d2wnia3, d2wnib2, d2wnic2, d2wnic3, d2wnid2
        automated match to d1dkla_
        complexed with so4
      3. 2128235Domain d2wnic1: 2wni C:13-405 [206902]
        Other proteins in same PDB: d2wnia2, d2wnia3, d2wnib2, d2wnic2, d2wnic3, d2wnid2
        automated match to d1dkla_
        complexed with so4
      4. 2128236Domain d2wnid1: 2wni D:13-405 [206903]
        Other proteins in same PDB: d2wnia2, d2wnia3, d2wnib2, d2wnic2, d2wnic3, d2wnid2
        automated match to d1dkla_
        complexed with so4
    3. Domains for 2wu0:
      1. 2128229Domain d2wu0a1: 2wu0 A:13-405 [207014]
        Other proteins in same PDB: d2wu0a2, d2wu0a3, d2wu0b2, d2wu0c2, d2wu0c3, d2wu0d2
        automated match to d1dkla_
        complexed with so4
      2. 2128230Domain d2wu0b1: 2wu0 B:13-405 [207015]
        Other proteins in same PDB: d2wu0a2, d2wu0a3, d2wu0b2, d2wu0c2, d2wu0c3, d2wu0d2
        automated match to d1dkla_
        complexed with so4
      3. 2128231Domain d2wu0c1: 2wu0 C:13-405 [207016]
        Other proteins in same PDB: d2wu0a2, d2wu0a3, d2wu0b2, d2wu0c2, d2wu0c3, d2wu0d2
        automated match to d1dkla_
        complexed with so4
      4. 2128232Domain d2wu0d1: 2wu0 D:13-405 [207017]
        Other proteins in same PDB: d2wu0a2, d2wu0a3, d2wu0b2, d2wu0c2, d2wu0c3, d2wu0d2
        automated match to d1dkla_
        complexed with so4
  4. 2128237Lyme disease spirochete (Borrelia burgdorferi) [TaxId:139] [226360] (1 PDB entry)
  5. 2128242Mycobacterium leprae [TaxId:561304] [226361] (1 PDB entry)
  6. 2128244Mycobacterium tuberculosis [TaxId:83332] [230484] (1 PDB entry)
  7. 2128247Toxoplasma gondii [TaxId:508771] [236270] (1 PDB entry)
  8. 2128252Yersinia kristensenii [TaxId:28152] [256188] (1 PDB entry)
  9. 2286583Neisseria gonorrhoeae [TaxId:521006] [329884] (1 PDB entry)
  10. 2295426Naegleria fowleri [TaxId:5763] [338727] (1 PDB entry)

More info for Protein automated matches from c.60.1.0: automated matches

Timeline for Protein automated matches from c.60.1.0: automated matches: