Lineage for d4iszb_ (4isz B:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1230714Fold d.261: Hypothetical protein PH1602 [103364] (1 superfamily)
    complex alpha+beta fold; contains a region of similarity to the ferredoxin-like fold
  4. 1230715Superfamily d.261.1: Hypothetical protein PH1602 [103365] (2 families) (S)
  5. 1230716Family d.261.1.1: Hypothetical protein PH1602 [103366] (2 proteins)
  6. 1230721Protein automated matches [194738] (2 species)
    not a true protein
  7. 1230725Species Pyrococcus horikoshii [TaxId:70601] [196969] (1 PDB entry)
  8. 1230726Domain d4iszb_: 4isz B: [196970]
    automated match to d1uc2a_
    protein/RNA complex; complexed with gav, mn, so4, suc

Details for d4iszb_

PDB Entry: 4isz (more details), 2.3 Å

PDB Description: rna ligase rtcb in complex with gtp alphas and mn(ii)
PDB Compounds: (B:) tRNA-splicing ligase RtcB

SCOPe Domain Sequences for d4iszb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d4iszb_ d.261.1.1 (B:) automated matches {Pyrococcus horikoshii [TaxId: 70601]}
vvplkridkirweipkfdkrmrvpgrvyadevllekmkndrtleqatnvamlpgiykysi
vmpdghqgygfpiggvaafdvkegvispggigydincgvrlirtnltekevrprikqlvd
tlfknvpsgvgsqgriklhwtqiddvlvdgakwavdngygwerdlerleeggrmegadpe
avsqrakqrgapqlgslgsgnhflevqvvdkifdpevakayglfegqvvvmvhtgsrglg
hqvasdylrimerairkyripwpdrelvsvpfqseegqryfsamkaaanfawanrqmith
wvresfqevfkqdpegdlgmdivydvahnigkveehevdgkrvkvivhrkgatrafppgh
eavprlyrdvgqpvlipgsmgtasyilagtegamketfgstchgagrvlsrkaatrqyrg
drirqellnrgiyvraasmrvvaeeapgayknvdnvvkvvseagiaklvarmrpigvakg

SCOPe Domain Coordinates for d4iszb_:

Click to download the PDB-style file with coordinates for d4iszb_.
(The format of our PDB-style files is described here.)

Timeline for d4iszb_: