Lineage for Protein: automated matches
- Root: SCOPe 2.03
Class c: Alpha and beta proteins (a/b) [51349] (147 folds) 
Fold c.116: alpha/beta knot [75216] (1 superfamily)
core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knotSuperfamily c.116.1: alpha/beta knot [75217] (9 families) 
known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
all known members have dimeric structures
Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 proteins)
fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain
Protein automated matches [196235] (1 species)
not a true protein
Species:
Haemophilus influenzae [TaxId:71421] [196236] (3 PDB entries) - Domain for 3axz:
Domain d3axza_: 3axz A: [196237]
automated match to d1uaja_
complexed with adn
- Domain for 4mcb:
Domain d4mcba_: 4mcb A: [235592]
automated match to d4mcca_
protein/RNA complex; complexed with 21w, act, gol, so4
- Domain for 4mcc:
Domain d4mcca_: 4mcc A: [227801]
automated match to d1uaja_
complexed with 21x
- Domain for 3axz:
More info for Protein automated matches from c.116.1.4: tRNA(m1G37)-methyltransferase TrmD
Timeline for Protein automated matches from c.116.1.4: tRNA(m1G37)-methyltransferase TrmD:
- Protein automated matches from c.116.1.4: tRNA(m1G37)-methyltransferase TrmD first appeared in SCOPe 2.02
- Protein automated matches from c.116.1.4: tRNA(m1G37)-methyltransferase TrmD appears in SCOPe 2.04
- Protein automated matches from c.116.1.4: tRNA(m1G37)-methyltransferase TrmD appears in the current release, SCOPe 2.08