SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2097504Fold c.6: 7-stranded beta/alpha barrel [51988] (3 superfamilies)
    variant of beta/alpha barrel; parallel beta-sheet barrel, closed, n=7, S=8; strand order 1234567; some members may have fewer strands
  4. 2097583Superfamily c.6.2: Glycoside hydrolase/deacetylase [88713] (9 families) (S)
    in the different families beta-barrels are similarly distorted but may vary in the number of strands
  5. 2097742Family c.6.2.0: automated matches [195981] (1 protein)
    not a true family
  6. 2097743Protein automated matches [195982] (3 species)
    not a true protein

Species:

  1. 2097744Emericella nidulans [TaxId:162425] [195983] (1 PDB entry)
  2. 2097747Encephalitozoon cuniculi [TaxId:284813] [255627] (1 PDB entry)
  3. 2293873Arthrobacter sp. [TaxId:1652545] [337174] (1 PDB entry)

More info for Protein automated matches from c.6.2.0: automated matches

Timeline for Protein automated matches from c.6.2.0: automated matches: