SCOPe 2.02: Domain d3vmkb_: 3vmk B:

Lineage for d3vmkb_ (3vmk B:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.77: Isocitrate/Isopropylmalate dehydrogenase-like [53658] (1 superfamily)
   consists of two intertwined (sub)domains related by pseudo dyad; duplication
   3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213A945867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.77.1: Isocitrate/Isopropylmalate dehydrogenase-like [53659] (6 families)
   the constituent families form similar dimers

5. Family c.77.1.1: Dimeric isocitrate & isopropylmalate dehydrogenases [53660] (4 proteins)
   the active site is between the two identical subunits

6. Protein 3-isopropylmalate dehydrogenase, IPMDH [53661] (10 species)

7. Species Shewanella benthica [TaxId:43661] [195907] (1 PDB entry)

8. Domain d3vmkb_: 3vmk B: [195908]
   automated match to d1cnza_
   complexed with cl, ipm, mg

Details for d3vmkb_

PDB Entry: 3vmk, 1.48 Å

PDB Description: 3-isopropylmalate dehydrogenase from shewanella benthica db21 mt-2

PDB Compounds: (B:) 3-isopropylmalate dehydrogenase

SCOPe Domain Sequences for d3vmkb_:

Sequence; same for both SEQRES and ATOM records:

>d3vmkb_ c.77.1.1 (B:) 3-isopropylmalate dehydrogenase, IPMDH {Shewanella benthica [TaxId: 43661]}
hhhhgssyqiavlagdgigpevmaearkvlaavekrfdlsieyseydvggaaidnhgcpl
peatlkgceaadavlfgsvggpkwehlppndqpergallplrghfelfcnmrpaklhpgl
ehmsplrsdisekgfdilcvreltggiyfgkpkgrqgegeneeafdtmrysrkeirriak
iafesaqgrrkkvtsvdkanvlacsvlwrevveevakdypdvelehiyidnatmqllrrp
nefdvmlcsnlfgdivsdeiamltgsmgllasismnsqgfgmyepaggsapdiagqgian
pvaqilsaalllrhslkledaalaieaavskalsdgyltcellpasersqakstsqmgdy
iaqaiaeg

Timeline for d3vmkb_:

• d3vmkb_ is new in SCOPe 2.02-stable
  
• d3vmkb_ appears in SCOPe 2.03
  
• d3vmkb_ appears in the current release, SCOPe 2.08, called d3vmkb1