SCOPe 2.08: Domain d4ap4b1: 4ap4 B:1-147

Lineage for d4ap4b1 (4ap4 B:1-147)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.20: UBC-like [54494] (1 superfamily)
   alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2

4. Superfamily d.20.1: UBC-like [54495] (5 families)

5. Family d.20.1.1: UBC-related [54496] (7 proteins)

6. Protein automated matches [190124] (13 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [186848] (52 PDB entries)

8. Domain d4ap4b1: 4ap4 B:1-147 [194914]
   Other proteins in same PDB: d4ap4b2, d4ap4c_, d4ap4f_
   automated match to d2c4pb_
   complexed with zn

Details for d4ap4b1

PDB Entry: 4ap4, 2.21 Å

PDB Description: rnf4 - ubch5a - ubiquitin heterotrimeric complex

PDB Compounds: (B:) ubiquitin-conjugating enzyme e2 d1

SCOPe Domain Sequences for d4ap4b1:

Sequence; same for both SEQRES and ATOM records:

>d4ap4b1 d.20.1.1 (B:1-147) automated matches {Human (Homo sapiens) [TaxId: 9606]}
malkriqkelsdlqrdppahcragpvgddlfhwqatimgppdsayqggvffltvhfptdy
pfkppkiafttkiyhpninsngsikldilrsqwspaltvskvllsicsllcdpnpddplv
pdiaqiyksdkekynrharewtqkyam

Timeline for d4ap4b1:

• d4ap4b1 first appeared in SCOPe 2.02, called d4ap4b_
  
• d4ap4b1 appears in SCOPe 2.07