Lineage for d4glwb_ (4glw B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2978525Fold d.142: ATP-grasp [56058] (2 superfamilies)
    Consists of two subdomains with different alpha+beta folds
    shares functional and structural similarities with the PIPK and protein kinase superfamilies
  4. 2979301Superfamily d.142.2: DNA ligase/mRNA capping enzyme, catalytic domain [56091] (6 families) (S)
    has a circularly permuted topology
  5. 2979317Family d.142.2.2: Adenylation domain of NAD+-dependent DNA ligase [56096] (2 proteins)
    automatically mapped to Pfam PF01653
  6. 2979345Protein automated matches [194553] (3 species)
    not a true protein
  7. 2979351Species Streptococcus pneumoniae [TaxId:488223] [194554] (1 PDB entry)
  8. 2979353Domain d4glwb_: 4glw B: [194555]
    automated match to d3baaa_
    protein/DNA complex; complexed with 0xt, nmn, so4

Details for d4glwb_

PDB Entry: 4glw (more details), 2 Å

PDB Description: dna ligase a in complex with inhibitor
PDB Compounds: (B:) DNA ligase

SCOPe Domain Sequences for d4glwb_:

Sequence, based on SEQRES records: (download)

>d4glwb_ d.142.2.2 (B:) automated matches {Streptococcus pneumoniae [TaxId: 488223]}
nkrmnelvallnryateyytsdnpsvsdseydrlyrelveletaypeqvladspthrvgg
kvldgfekyshqyplyslqdafsreeldafdarvrkevahptyicelkidglsisltyek
gilvagvtrgdgsigenitenlkrvkdipltlpeelditvrgecymprasfdqvnqarqe
ngepefanprnaaagtlrqldtavvakrnlatflyqeaspstrdsqekglkyleqlgfvv
npkrilaenideiwnfiqevgqerenlpydidgvvikvndlasqeelgftvkapkwavay
kfp

Sequence, based on observed residues (ATOM records): (download)

>d4glwb_ d.142.2.2 (B:) automated matches {Streptococcus pneumoniae [TaxId: 488223]}
nkrmnelvallnyrelveletaypeqvladspthrvggkvldgfekyshqyplyslqdaf
sreeldafdarvrkevahptyicelkidglsisltyekgilvagvtrgdgsigenitenl
krvkdipltlpeelditvrgecymprasfdqvnqarqengepefanprnaaagtlrqldt
avvakrnlatflyqeaspstrdsqekglkyleqlgfvvnpkrilaenideiwnfiqevgq
erenlpydidgvvikvndlasqeelgftvkapkwavaykfp

SCOPe Domain Coordinates for d4glwb_:

Click to download the PDB-style file with coordinates for d4glwb_.
(The format of our PDB-style files is described here.)

Timeline for d4glwb_: